Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase nifs | CSX02_01210 | Not Available | Negative | 229577 - 230731 | 42129.6 |
| 16s rrna methyltransferase | CSX02_01215 | Not Available | Negative | 230751 - 231485 | 27669.5 |
| 50s ribosomal protein l11 methyltransferase | CSX02_01220 | Not Available | Negative | 231489 - 232448 | 35296.0 |
| radical sam protein | CSX02_01225 | Not Available | Negative | 232445 - 233362 | 34207.7 |
| molecular chaperone dnaj | CSX02_01230 | Not Available | Negative | 233426 - 233851 | 17026.9 |
| molecular chaperone dnaj | CSX02_01235 | Not Available | Negative | 233993 - 235141 | 41639.2 |
| molecular chaperone dnak | CSX02_01240 | Not Available | Negative | 235150 - 237042 | 67146.8 |
| nucleotide exchange factor grpe | CSX02_01245 | Not Available | Negative | 237092 - 237766 | 25469.4 |
| heat-inducible transcription repressor hrca | CSX02_01250 | Not Available | Negative | 237768 - 238844 | 40102.8 |
| coproporphyrinogen iii oxidase | CSX02_01255 | Not Available | Negative | 239016 - 240218 | 46425.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

