Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| reactive intermediate/imine deaminase | CSX02_13295 | Not Available | Positive | 2846644 - 2847018 | 13205.8 |
| putative motility protein | CSX02_13300 | Not Available | Negative | 2847070 - 2847285 | 7768.46 |
| hydrolase nlp/p60 | CSX02_13305 | Not Available | Positive | 2847836 - 2849038 | 42416.4 |
| teichoic acid biosynthesis protein | CSX02_13310 | Not Available | Positive | 2849427 - 2850086 | 24943.3 |
| membrane protein | CSX02_13315 | Not Available | Positive | 2850074 - 2850979 | 33313.5 |
| cdar family transcriptional regulator | CSX02_13320 | Not Available | Positive | 2851119 - 2852204 | 41466.8 |
| cell division atp-binding protein ftse | CSX02_13325 | Not Available | Positive | 2852230 - 2852913 | 25461.2 |
| abc transporter permease | CSX02_13330 | Not Available | Positive | 2852903 - 2853811 | 33933.8 |
| peptidase s41 | CSX02_13335 | Not Available | Positive | 2853858 - 2855189 | 48896.6 |
| peptide chain release factor 2 | CSX02_13340 | Not Available | Positive | 2855258 - 2856398 | 43229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

