Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_13245 | Not Available | Positive | 2835769 - 2837808 | 78947.4 |
| nadh:flavin oxidoreductase | CSX02_13250 | Not Available | Positive | 2837883 - 2839847 | 70892.6 |
| hypothetical protein | CSX02_13255 | Not Available | Positive | 2839888 - 2841114 | 44549.8 |
| hypothetical protein | CSX02_13260 | Not Available | Positive | 2841205 - 2842086 | 32995.9 |
| gnat family acetyltransferase | CSX02_13265 | Not Available | Positive | 2842115 - 2842408 | 11564.5 |
| Trna-ile | Not Available | Not Available | Positive | 2842458 - 2842531 | Not Available |
| hypothetical protein | CSX02_13275 | Not Available | Positive | 2842665 - 2844791 | 76496.1 |
| Trna-gln | Not Available | Not Available | Positive | 2844870 - 2844945 | Not Available |
| acyl-[acyl-carrier-protein] thioesterase | CSX02_13285 | Not Available | Positive | 2845002 - 2845709 | 27723.0 |
| rna-binding protein | CSX02_13290 | Not Available | Positive | 2845768 - 2846604 | 31416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

