Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter permease | CSX02_13195 | Not Available | Positive | 2825595 - 2826446 | 32123.0 |
| carbohydrate abc transporter permease | CSX02_13200 | Not Available | Positive | 2826458 - 2827357 | 33479.9 |
| duf624 domain-containing protein | CSX02_13205 | Not Available | Positive | 2827365 - 2827988 | 23593.6 |
| hypothetical protein | CSX02_13210 | Not Available | Positive | 2828045 - 2829613 | 58043.1 |
| choline esterase | CSX02_13215 | Not Available | Positive | 2829681 - 2831009 | 49775.9 |
| hypothetical protein | CSX02_13220 | Not Available | Positive | 2831037 - 2831273 | 8794.42 |
| acetyl-coa acetyltransferase | CSX02_13225 | Not Available | Positive | 2831276 - 2832565 | 46679.3 |
| hypothetical protein | CSX02_13230 | Not Available | Positive | 2832591 - 2833016 | 16152.5 |
| glycosyl hydrolase | CSX02_13235 | Not Available | Positive | 2833128 - 2835326 | 81154.7 |
| hypothetical protein | CSX02_13240 | Not Available | Positive | 2835338 - 2835766 | 16644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

