Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_13145 | Not Available | Positive | 2810319 - 2812076 | 66282.5 |
| oxidoreductase | CSX02_13150 | Not Available | Positive | 2812177 - 2813244 | 40056.0 |
| hypothetical protein | CSX02_13155 | Not Available | Positive | 2813433 - 2814776 | 47662.7 |
| hypothetical protein | CSX02_13160 | Not Available | Positive | 2814812 - 2815270 | 17476.5 |
| xylose isomerase | CSX02_13165 | Not Available | Positive | 2815283 - 2816332 | 40239.9 |
| hypothetical protein | CSX02_13170 | Not Available | Negative | 2816329 - 2818698 | 91836.2 |
| hypothetical protein | CSX02_13175 | Not Available | Negative | 2818688 - 2821120 | 93563.2 |
| fmn reductase | CSX02_13180 | Not Available | Positive | 2821287 - 2822249 | 35715.7 |
| fad-binding dehydrogenase | CSX02_13185 | Not Available | Positive | 2822275 - 2823723 | 52473.1 |
| gfo/idh/moca family oxidoreductase | CSX02_13190 | Not Available | Positive | 2823760 - 2824872 | 40768.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

