Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_13095 | Not Available | Positive | 2796932 - 2797159 | 8297.7 |
| hypothetical protein | CSX02_13100 | Not Available | Positive | 2797330 - 2797683 | 13892.8 |
| ion transporter | CSX02_13105 | Not Available | Negative | 2797705 - 2798442 | 28017.4 |
| hypothetical protein | CSX02_13110 | Not Available | Positive | 2798865 - 2800589 | 62270.9 |
| phosphoglycerate mutase | CSX02_13115 | Not Available | Positive | 2800730 - 2801308 | 22076.6 |
| vitamin b12 dependent methionine synthase, activation domain protein | CSX02_13120 | Not Available | Positive | 2801313 - 2802074 | 28966.5 |
| homocysteine methyltransferase | CSX02_13125 | Not Available | Positive | 2802111 - 2804567 | 87893.4 |
| bifunctional homocysteine s-methyltransferase/methylenetetrahydrofolate reductase | CSX02_13130 | Not Available | Positive | 2804569 - 2806365 | 67015.5 |
| hypothetical protein | CSX02_13135 | Not Available | Positive | 2806428 - 2808626 | 84773.5 |
| hypothetical protein | CSX02_13140 | Not Available | Positive | 2808623 - 2810326 | 64698.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

