Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyrroline-5-carboxylate reductase | CSX02_12995 | Not Available | Negative | 2762453 - 2763256 | 28745.1 |
| glutamate 5-kinase | CSX02_13000 | Not Available | Negative | 2763270 - 2764043 | 27360.8 |
| hypothetical protein | CSX02_13005 | Not Available | Positive | 2764229 - 2768461 | 152968.0 |
| xre family transcriptional regulator | CSX02_13010 | Not Available | Negative | 2768629 - 2769003 | 14556.6 |
| hypothetical protein | CSX02_13015 | Not Available | Positive | 2769211 - 2769792 | 22884.0 |
| hypothetical protein | CSX02_13020 | Not Available | Positive | 2769789 - 2771912 | 80466.7 |
| hypothetical protein | CSX02_13025 | Not Available | Positive | 2771949 - 2773535 | 59378.5 |
| hypothetical protein | CSX02_13030 | Not Available | Positive | 2773547 - 2773999 | 17504.6 |
| hypothetical protein | CSX02_13035 | Not Available | Positive | 2774321 - 2776024 | 62348.8 |
| hypothetical protein | CSX02_13040 | Not Available | Negative | 2776281 - 2778773 | 93241.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

