Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease z | CSX02_12945 | Not Available | Positive | 2755661 - 2756572 | 33833.4 |
| hypothetical protein | CSX02_12950 | Not Available | Positive | 2756576 - 2757163 | 22199.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | CSX02_12955 | Not Available | Positive | 2757169 - 2758191 | 36268.5 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CSX02_12960 | Not Available | Positive | 2758217 - 2758909 | 25938.3 |
| Trna-ser | Not Available | Not Available | Positive | 2759026 - 2759111 | Not Available |
| Trna-ser | Not Available | Not Available | Positive | 2759200 - 2759289 | Not Available |
| hypothetical protein | CSX02_12975 | Not Available | Positive | 2759577 - 2759911 | 12379.2 |
| hypothetical protein | CSX02_12980 | Not Available | Positive | 2760000 - 2760371 | 13500.3 |
| fad-dependent oxidoreductase | CSX02_12985 | Not Available | Negative | 2760399 - 2761769 | 50323.4 |
| xanthine phosphoribosyltransferase | CSX02_12990 | Not Available | Negative | 2761849 - 2762430 | 21419.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

