Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein subunit beta/fixa family protein | CSX02_12835 | Not Available | Positive | 2736840 - 2737625 | 28038.8 |
| electron transfer flavoprotein subunit alpha/fixb family protein | CSX02_12840 | Not Available | Positive | 2737681 - 2738724 | 37113.5 |
| hypothetical protein | CSX02_12845 | Not Available | Positive | 2738863 - 2739267 | 14474.5 |
| hypothetical protein | CSX02_12850 | Not Available | Positive | 2739280 - 2740785 | 55985.9 |
| hypothetical protein | CSX02_12855 | Not Available | Positive | 2740914 - 2741363 | 16502.6 |
| hypothetical protein | CSX02_12860 | Not Available | Positive | 2741382 - 2743904 | 94891.2 |
| hpr family phosphocarrier protein | CSX02_12865 | Not Available | Positive | 2744056 - 2744307 | 9096.81 |
| hypothetical protein | CSX02_12870 | Not Available | Positive | 2744332 - 2744727 | 14242.3 |
| Trna-gly | Not Available | Not Available | Positive | 2744772 - 2744842 | Not Available |
| hypothetical protein | CSX02_12880 | Not Available | Positive | 2744886 - 2745380 | 19677.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

