Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_12785 | Not Available | Positive | 2722009 - 2722395 | 14570.8 |
| atp-dependent recd-like dna helicase | CSX02_12790 | Not Available | Positive | 2722492 - 2724699 | 82946.5 |
| carbamoyl phosphate synthase small subunit | CSX02_12795 | Not Available | Positive | 2724881 - 2725945 | 38672.1 |
| carbamoyl phosphate synthase large subunit | CSX02_12800 | Not Available | Positive | 2725959 - 2729201 | 118496.0 |
| hypothetical protein | CSX02_12805 | Not Available | Positive | 2729283 - 2730590 | 51707.4 |
| phosphohydrolase | CSX02_12810 | Not Available | Positive | 2730744 - 2731952 | 45891.8 |
| hypothetical protein | CSX02_12815 | Not Available | Positive | 2732039 - 2733277 | 47847.9 |
| acetyl-coa c-acyltransferase | CSX02_12820 | Not Available | Positive | 2733422 - 2734609 | 40728.4 |
| 3-hydroxybutyryl-coa dehydrogenase | CSX02_12825 | Not Available | Positive | 2734766 - 2735638 | 31379.4 |
| acyl-coa dehydrogenase | CSX02_12830 | Not Available | Positive | 2735672 - 2736826 | 41795.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

