Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | CSX02_12735 | Not Available | Positive | 2711362 - 2712861 | 56544.1 |
| hypoxanthine phosphoribosyltransferase | CSX02_12740 | Not Available | Positive | 2712867 - 2713403 | 20046.3 |
| atp-dependent zinc metalloprotease ftsh | CSX02_12745 | Not Available | Positive | 2713514 - 2715259 | 63964.9 |
| dna-binding transcriptional regulator | CSX02_12750 | Not Available | Positive | 2715575 - 2716123 | 20694.6 |
| Trna-tyr | Not Available | Not Available | Positive | 2716651 - 2716732 | Not Available |
| hypothetical protein | CSX02_12760 | Not Available | Negative | 2716776 - 2718878 | 80429.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | CSX02_12765 | Not Available | Positive | 2719028 - 2719765 | 27768.7 |
| hypothetical protein | CSX02_12770 | Not Available | Positive | 2719959 - 2720207 | 9404.33 |
| flagellar basal body and hook protein | CSX02_12775 | Not Available | Positive | 2720355 - 2721155 | 29262.1 |
| flagellar hook-basal body protein | CSX02_12780 | Not Available | Positive | 2721172 - 2721990 | 29710.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

