Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | CSX02_01060 | Not Available | Negative | 195644 - 197149 | 53619.5 |
| hypothetical protein | CSX02_01065 | Not Available | Negative | 197168 - 201049 | 146127.0 |
| signal peptidase i | CSX02_01070 | Not Available | Negative | 201088 - 201774 | 25869.2 |
| hypothetical protein | CSX02_01075 | Not Available | Negative | 201722 - 201931 | 8081.79 |
| glycine--trna ligase | CSX02_01080 | Not Available | Negative | 202134 - 203531 | 53809.3 |
| hypothetical protein | CSX02_01085 | Not Available | Negative | 203554 - 204357 | 29453.8 |
| dna repair protein reco | CSX02_01090 | Not Available | Negative | 204419 - 205156 | 27731.4 |
| gtpase era | CSX02_01095 | Not Available | Negative | 205170 - 206075 | 34480.8 |
| peptidase m16 | CSX02_01100 | Not Available | Negative | 206091 - 209012 | 111403.0 |
| cold-shock protein | CSX02_01105 | Not Available | Negative | 209125 - 209331 | 7499.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

