Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylpyrophosphate synthetase | CSX02_12635 | Not Available | Negative | 2687887 - 2689074 | 44796.5 |
| dna replication protein dnac | CSX02_12640 | Not Available | Negative | 2689122 - 2690108 | 37356.1 |
| dna replication protein dnad | CSX02_12645 | Not Available | Negative | 2690123 - 2691187 | 40576.3 |
| udp-n-acetylmuramate--l-alanine ligase | CSX02_12650 | Not Available | Negative | 2691483 - 2692865 | 50871.7 |
| glucose-1-phosphate adenylyltransferase | CSX02_12655 | Not Available | Positive | 2693144 - 2694412 | 46990.1 |
| glucose-1-phosphate adenylyltransferase subunit glgd | CSX02_12660 | Not Available | Positive | 2694412 - 2695530 | 42909.3 |
| septation regulator spovg | CSX02_12665 | Not Available | Positive | 2695540 - 2695797 | 9726.83 |
| aminoacyl-trna hydrolase | CSX02_12670 | Not Available | Positive | 2695842 - 2696429 | 21500.2 |
| transcription-repair coupling factor | CSX02_12675 | Not Available | Positive | 2696431 - 2699952 | 133950.0 |
| hypothetical protein | CSX02_12680 | Not Available | Positive | 2699998 - 2701071 | 40048.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

