Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rrna methyltransferase | CSX02_12585 | Not Available | Positive | 2679091 - 2679906 | 30107.7 |
| hypothetical protein | CSX02_12590 | Not Available | Positive | 2680100 - 2680516 | 15912.1 |
| hypothetical protein | CSX02_12595 | Not Available | Positive | 2680519 - 2681334 | 32126.7 |
| hypothetical protein | CSX02_12600 | Not Available | Positive | 2681336 - 2682025 | 27284.1 |
| multidrug abc transporter atp-binding protein | CSX02_12605 | Not Available | Positive | 2682030 - 2682659 | 23356.8 |
| hypothetical protein | CSX02_12610 | Not Available | Positive | 2682656 - 2683393 | 28355.3 |
| hydrogenase nickel incorporation protein hypa | CSX02_12615 | Not Available | Negative | 2683390 - 2683737 | 13089.7 |
| pyridine nucleotide-disulfide oxidoreductase | CSX02_12620 | Not Available | Negative | 2683750 - 2686515 | 101645.0 |
| hypothetical protein | CSX02_12625 | Not Available | Negative | 2686830 - 2687030 | 8059.61 |
| adp-ribose pyrophosphatase | CSX02_12630 | Not Available | Positive | 2687296 - 2687817 | 20505.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

