Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione peroxidase | CSX02_12485 | Not Available | Positive | 2660144 - 2660692 | 20715.7 |
| hypothetical protein | CSX02_12490 | Not Available | Positive | 2660797 - 2661297 | 17498.0 |
| patatin family protein | CSX02_12495 | Not Available | Positive | 2661395 - 2662246 | 32037.4 |
| mbl fold hydrolase | CSX02_12500 | Not Available | Positive | 2662266 - 2663873 | 60444.9 |
| duf896 family protein | CSX02_12505 | Not Available | Negative | 2663881 - 2664093 | 8054.66 |
| sodium-independent anion transporter | CSX02_12510 | Not Available | Negative | 2664104 - 2665783 | 59726.8 |
| pts sugar transporter subunit iid | CSX02_12515 | Not Available | Positive | 2665927 - 2667012 | 36876.5 |
| gntr family transcriptional regulator | CSX02_12520 | Not Available | Positive | 2667124 - 2667483 | 13527.5 |
| abc transporter atp-binding protein | CSX02_12525 | Not Available | Positive | 2667493 - 2668365 | 31983.8 |
| hypothetical protein | CSX02_12530 | Not Available | Positive | 2668367 - 2669026 | 23226.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

