Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_12385 | Not Available | Positive | 2634366 - 2635055 | 25750.4 |
| trk system potassium transporter trka | CSX02_12390 | Not Available | Positive | 2635102 - 2636493 | 51018.1 |
| potassium transporter kefa | CSX02_12395 | Not Available | Positive | 2636504 - 2637967 | 53341.6 |
| histidinol phosphate phosphatase | CSX02_12400 | Not Available | Positive | 2637978 - 2638748 | 29852.5 |
| mate family efflux transporter | CSX02_12405 | Not Available | Positive | 2638766 - 2640163 | 50564.4 |
| endonuclease | CSX02_12410 | Not Available | Positive | 2640175 - 2641245 | 39059.4 |
| hypothetical protein | CSX02_12415 | Not Available | Positive | 2641667 - 2641957 | 11158.4 |
| metallophosphoesterase | CSX02_12420 | Not Available | Positive | 2641978 - 2642472 | 18212.4 |
| aaa family atpase | CSX02_12425 | Not Available | Positive | 2642514 - 2643821 | 50675.9 |
| abc transporter atp-binding protein | CSX02_12430 | Not Available | Positive | 2643824 - 2645779 | 74435.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

