Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_12235 | Not Available | Positive | 2601601 - 2602104 | 18909.6 |
| gnat family n-acetyltransferase | CSX02_12240 | Not Available | Positive | 2602128 - 2602652 | 20309.2 |
| hypothetical protein | CSX02_12245 | Not Available | Positive | 2602787 - 2603233 | 16977.1 |
| adenosine deaminase | CSX02_12250 | Not Available | Positive | 2603358 - 2604320 | 35970.0 |
| histidine ammonia-lyase | CSX02_12255 | Not Available | Negative | 2604399 - 2605103 | 27053.0 |
| hypothetical protein | CSX02_12260 | Not Available | Positive | 2605496 - 2605771 | 10396.5 |
| hypothetical protein | CSX02_12265 | Not Available | Positive | 2606406 - 2607194 | 30918.2 |
| blai/meci/copy family transcriptional regulator | CSX02_12270 | Not Available | Positive | 2607317 - 2607682 | 13815.5 |
| hypothetical protein | CSX02_12275 | Not Available | Positive | 2607685 - 2609040 | 50535.2 |
| pyridoxine kinase | CSX02_12280 | Not Available | Positive | 2609222 - 2610082 | 30426.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

