Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrp/asnc family transcriptional regulator | CSX02_12185 | Not Available | Positive | 2593174 - 2593653 | 17845.9 |
| aromatic amino acid aminotransferase | CSX02_12190 | Not Available | Positive | 2593653 - 2594822 | 43753.8 |
| trna (cytidine(34)-2'-o)-methyltransferase | CSX02_12195 | Not Available | Positive | 2594822 - 2595328 | 19055.6 |
| energy-coupling factor transporter atpase | CSX02_12200 | Not Available | Positive | 2595325 - 2597121 | 66443.5 |
| energy-coupling factor transporter transmembrane protein ecft | CSX02_12205 | Not Available | Positive | 2597140 - 2597955 | 29966.3 |
| trna pseudouridine(38-40) synthase trua | CSX02_12210 | Not Available | Positive | 2597965 - 2598702 | 27300.7 |
| 50s ribosomal protein l13 | CSX02_12215 | Not Available | Positive | 2598934 - 2599362 | 15984.5 |
| 30s ribosomal protein s9 | CSX02_12220 | Not Available | Positive | 2599379 - 2599774 | 14680.8 |
| hypothetical protein | CSX02_12225 | Not Available | Positive | 2600181 - 2600723 | 20783.4 |
| hypothetical protein | CSX02_12230 | Not Available | Positive | 2600724 - 2601020 | 10959.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

