Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromosome partitioning protein parb | CSX02_00995 | Not Available | Negative | 182968 - 183915 | 35954.8 |
| chromosome partitioning protein para | CSX02_01000 | Not Available | Negative | 183872 - 184696 | 29820.4 |
| replication initiator a domain-containing protein | CSX02_01005 | Not Available | Negative | 184706 - 185635 | 35749.5 |
| hypothetical protein | CSX02_01015 | Not Available | Negative | 186913 - 187263 | 13673.1 |
| hypothetical protein | CSX02_01020 | Not Available | Negative | 187323 - 187685 | 13918.9 |
| pyruvate, phosphate dikinase | CSX02_01025 | Not Available | Negative | 187984 - 190623 | 96709.0 |
| hypothetical protein | CSX02_01040 | Not Available | Negative | 192468 - 193262 | 29770.6 |
| hypothetical protein | CSX02_01045 | Not Available | Negative | 193255 - 193767 | 19433.1 |
| hypothetical protein | CSX02_01050 | Not Available | Negative | 193764 - 194651 | 32680.9 |
| class c sortase | CSX02_01055 | Not Available | Negative | 194735 - 195559 | 30780.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

