Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | CSX02_12135 | Not Available | Positive | 2581500 - 2582966 | 54894.7 |
| glycoside hydrolase 43 family protein | CSX02_12140 | Not Available | Positive | 2582991 - 2584631 | 61851.0 |
| lipase | CSX02_12145 | Not Available | Positive | 2584628 - 2585584 | 36082.2 |
| hypothetical protein | CSX02_12150 | Not Available | Positive | 2585650 - 2586390 | 28313.8 |
| hypothetical protein | CSX02_12155 | Not Available | Positive | 2586402 - 2588027 | 61549.5 |
| methanol dehydrogenase | CSX02_12160 | Not Available | Positive | 2588014 - 2588823 | 29353.9 |
| dna polymerase iii subunit epsilon | CSX02_12165 | Not Available | Positive | 2588839 - 2589555 | 27208.9 |
| hypothetical protein | CSX02_12170 | Not Available | Negative | 2589552 - 2590157 | 22782.3 |
| vancomycin resistance protein | CSX02_12175 | Not Available | Positive | 2590459 - 2592090 | 59502.0 |
| hydrogenase maturation factor | CSX02_12180 | Not Available | Positive | 2592168 - 2593148 | 35059.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

