Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | CSX02_12030 | Not Available | Negative | 2562313 - 2562963 | 24513.5 |
| arac family transcriptional regulator | CSX02_12035 | Not Available | Negative | 2563214 - 2564215 | 38656.4 |
| sodium:proton exchanger | CSX02_12040 | Not Available | Positive | 2564479 - 2565468 | 34864.7 |
| hypothetical protein | CSX02_12045 | Not Available | Positive | 2565615 - 2566376 | 28332.9 |
| hypothetical protein | CSX02_12050 | Not Available | Positive | 2566360 - 2566557 | 7494.81 |
| precorrin-6b methylase | CSX02_12055 | Not Available | Positive | 2566538 - 2567437 | 33619.5 |
| hypothetical protein | CSX02_12060 | Not Available | Positive | 2567450 - 2569243 | 67217.0 |
| degv family protein | CSX02_12065 | Not Available | Positive | 2569389 - 2570246 | 31620.0 |
| hypothetical protein | CSX02_12070 | Not Available | Positive | 2570378 - 2570632 | 10119.9 |
| hypothetical protein | CSX02_12075 | Not Available | Positive | 2570775 - 2571147 | 14303.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

