Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_11925 | Not Available | Positive | 2543915 - 2545831 | 72291.1 |
| hypothetical protein | CSX02_11930 | Not Available | Negative | 2545821 - 2546417 | 22334.2 |
| thiamine biosynthesis protein this | CSX02_11935 | Not Available | Positive | 2547035 - 2547229 | 7047.27 |
| thiamine biosynthesis protein thif | CSX02_11940 | Not Available | Positive | 2547231 - 2547866 | 23100.1 |
| thiazole synthase | CSX02_11945 | Not Available | Positive | 2547859 - 2548623 | 26854.7 |
| 2-iminoacetate synthase thih | CSX02_11950 | Not Available | Positive | 2548633 - 2549907 | 48440.3 |
| thiamine phosphate synthase | CSX02_11955 | Not Available | Positive | 2549915 - 2550487 | 21280.9 |
| purine biosynthesis protein purh | CSX02_11960 | Not Available | Negative | 2550504 - 2550734 | 8853.44 |
| hypothetical protein | CSX02_11965 | Not Available | Positive | 2550867 - 2551940 | 41467.6 |
| hypothetical protein | CSX02_11970 | Not Available | Negative | 2552288 - 2553514 | 44274.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

