Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | CSX02_11725 | Not Available | Negative | 2499403 - 2501433 | 77328.6 |
| hypothetical protein | CSX02_11730 | Not Available | Negative | 2501455 - 2501781 | 12009.3 |
| vanz family protein | CSX02_11735 | Not Available | Negative | 2501783 - 2502256 | 18139.0 |
| orotate phosphoribosyltransferase | CSX02_11740 | Not Available | Negative | 2502243 - 2502923 | 25136.1 |
| hypothetical protein | CSX02_11745 | Not Available | Negative | 2503076 - 2503447 | 13987.7 |
| hypothetical protein | CSX02_11750 | Not Available | Negative | 2503499 - 2504113 | 23870.7 |
| tigr00268 family protein | CSX02_11755 | Not Available | Negative | 2504138 - 2504986 | 31924.1 |
| dihydroorotate dehydrogenase b catalytic subunit | CSX02_11760 | Not Available | Negative | 2504996 - 2505913 | 32504.4 |
| dihydroorotate dehydrogenase | CSX02_11765 | Not Available | Negative | 2505941 - 2506729 | 28206.2 |
| orotidine-5'-phosphate decarboxylase | CSX02_11770 | Not Available | Negative | 2506745 - 2507671 | 33395.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

