Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3847 domain-containing protein | CSX02_00940 | Not Available | Negative | 175841 - 176137 | 11453.8 |
| rrna (guanine-n1)-methyltransferase | CSX02_00945 | Not Available | Negative | 176269 - 177102 | 32188.8 |
| mfs transporter | CSX02_00950 | Not Available | Negative | 177285 - 178505 | 43640.8 |
| hypothetical protein | CSX02_00955 | Not Available | Negative | 178881 - 179174 | 10393.5 |
| hypothetical protein | CSX02_00965 | Not Available | Negative | 179332 - 179526 | 7014.44 |
| hypothetical protein | CSX02_00970 | Not Available | Negative | 179574 - 179870 | 11581.7 |
| hypothetical protein | CSX02_00975 | Not Available | Negative | 180004 - 180198 | 7133.33 |
| recombinase | CSX02_00980 | Not Available | Negative | 180277 - 182151 | 72894.6 |
| conjugal transfer protein trag | CSX02_00985 | Not Available | Negative | 182175 - 182480 | 11193.9 |
| hypothetical protein | CSX02_00990 | Not Available | Negative | 182477 - 182956 | 18202.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

