Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replication-associated recombination protein rara | CSX02_11525 | Not Available | Negative | 2442671 - 2444005 | 49352.6 |
| atp-dependent chaperone clpb | CSX02_11530 | Not Available | Negative | 2444304 - 2446802 | 94853.7 |
| hypothetical protein | CSX02_11535 | Not Available | Negative | 2447082 - 2451986 | 180119.0 |
| hypothetical protein | CSX02_11540 | Not Available | Positive | 2452275 - 2452622 | 12952.8 |
| hypothetical protein | CSX02_11545 | Not Available | Negative | 2452814 - 2454175 | 51003.5 |
| polymerase | CSX02_11550 | Not Available | Negative | 2454334 - 2455722 | 50802.2 |
| valine--trna ligase | CSX02_11555 | Not Available | Negative | 2455898 - 2458537 | 101457.0 |
| s-adenosylhomocysteine nucleosidase | CSX02_11560 | Not Available | Negative | 2459116 - 2459814 | 24774.9 |
| s-ribosylhomocysteine lyase | CSX02_11565 | Not Available | Negative | 2459863 - 2460327 | 17706.0 |
| hypothetical protein | CSX02_11570 | Not Available | Negative | 2460344 - 2461810 | 52782.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

