Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose 5-phosphate isomerase b | CSX02_11425 | Not Available | Negative | 2421687 - 2422133 | 15775.8 |
| gtpase hflx | CSX02_11430 | Not Available | Negative | 2422150 - 2423421 | 47216.6 |
| hypothetical protein | CSX02_11435 | Not Available | Negative | 2423418 - 2424497 | 41528.6 |
| maltose phosphorylase | CSX02_11440 | Not Available | Negative | 2424551 - 2426800 | 85818.2 |
| arac family transcriptional regulator | CSX02_11445 | Not Available | Positive | 2426986 - 2427864 | 34447.1 |
| phosphatase pap2 family protein | CSX02_11450 | Not Available | Negative | 2427858 - 2428352 | 18528.3 |
| tetr/acrr family transcriptional regulator | CSX02_11455 | Not Available | Negative | 2428356 - 2428892 | 20461.6 |
| adenine phosphoribosyltransferase | CSX02_11460 | Not Available | Negative | 2428892 - 2429416 | 19020.3 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CSX02_11465 | Not Available | Negative | 2429419 - 2430165 | 27823.1 |
| hypothetical protein | CSX02_11470 | Not Available | Negative | 2430196 - 2431584 | 51714.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

