Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis protein flag | CSX02_11325 | Not Available | Positive | 2396987 - 2397415 | 15646.4 |
| hypothetical protein | CSX02_11330 | Not Available | Positive | 2397432 - 2399003 | 56919.2 |
| flagellar export chaperone flis | CSX02_11335 | Not Available | Positive | 2399033 - 2399425 | 15100.4 |
| flagellin biosynthesis protein flgn | CSX02_11340 | Not Available | Positive | 2399403 - 2399900 | 19371.0 |
| flagellar hook protein | CSX02_11345 | Not Available | Positive | 2400177 - 2401565 | 48399.1 |
| flagellar hook protein | CSX02_11350 | Not Available | Positive | 2402005 - 2403414 | 49083.3 |
| hypothetical protein | CSX02_11355 | Not Available | Positive | 2403544 - 2405247 | 62787.1 |
| flagellar hook protein | CSX02_11360 | Not Available | Positive | 2405524 - 2406951 | 50280.3 |
| gatb/yqey domain-containing protein | CSX02_11365 | Not Available | Positive | 2407091 - 2407528 | 16072.6 |
| hypothetical protein | CSX02_11370 | Not Available | Positive | 2407552 - 2409600 | 79024.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

