Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | CSX02_11225 | Not Available | Positive | 2376952 - 2379069 | 78104.3 |
| elongation factor tu | CSX02_11230 | Not Available | Positive | 2379190 - 2380377 | 43788.4 |
| hypothetical protein | CSX02_11235 | Not Available | Positive | 2380770 - 2381177 | 15561.3 |
| hypothetical protein | CSX02_11240 | Not Available | Positive | 2381232 - 2382056 | 30858.5 |
| hypothetical protein | CSX02_11245 | Not Available | Positive | 2382043 - 2382735 | 26468.7 |
| hypothetical protein | CSX02_11250 | Not Available | Positive | 2382743 - 2383441 | 27925.8 |
| multidrug abc transporter atp-binding protein | CSX02_11255 | Not Available | Positive | 2383464 - 2384111 | 23937.1 |
| hypothetical protein | CSX02_11260 | Not Available | Positive | 2384117 - 2384812 | 26719.5 |
| hypothetical protein | CSX02_11265 | Not Available | Positive | 2384895 - 2385221 | 12549.9 |
| proline--trna ligase | CSX02_11270 | Not Available | Positive | 2385526 - 2387253 | 63749.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

