Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit sece | CSX02_11175 | Not Available | Positive | 2364254 - 2364463 | 7626.43 |
| transcription termination/antitermination factor nusg | CSX02_11180 | Not Available | Positive | 2364482 - 2365000 | 19371.5 |
| 50s ribosomal protein l11 | CSX02_11185 | Not Available | Positive | 2365014 - 2365439 | 14796.2 |
| 50s ribosomal protein l1 | CSX02_11190 | Not Available | Positive | 2365507 - 2366202 | 24818.1 |
| 50s ribosomal protein l10 | CSX02_11195 | Not Available | Positive | 2366461 - 2367021 | 19638.3 |
| 50s ribosomal protein l7/l12 | CSX02_11200 | Not Available | Positive | 2367069 - 2367446 | 12956.6 |
| dna-directed rna polymerase subunit beta | CSX02_11205 | Not Available | Positive | 2367725 - 2371804 | 152940.0 |
| dna-directed rna polymerase subunit beta' | CSX02_11210 | Not Available | Positive | 2371823 - 2375749 | 146063.0 |
| 30s ribosomal protein s12 | CSX02_11215 | Not Available | Positive | 2375888 - 2376307 | 15185.5 |
| 30s ribosomal protein s7 | CSX02_11220 | Not Available | Positive | 2376436 - 2376930 | 18448.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

