Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lactoylglutathione lyase | CSX02_00885 | Not Available | Negative | 163537 - 163914 | 13956.7 |
| sam-dependent methyltransferase | CSX02_00890 | Not Available | Negative | 163980 - 164732 | 28690.2 |
| tautomerase ppta | CSX02_00895 | Not Available | Negative | 164764 - 165003 | 9069.77 |
| hypothetical protein | CSX02_00900 | Not Available | Negative | 165259 - 166407 | 44130.5 |
| dna-binding protein | CSX02_00905 | Not Available | Negative | 166882 - 167364 | 18487.7 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | CSX02_00910 | Not Available | Negative | 167536 - 167988 | 17544.0 |
| atpase | CSX02_00915 | Not Available | Negative | 168380 - 169777 | 53256.7 |
| hypothetical protein | CSX02_00920 | Not Available | Negative | 169925 - 170338 | 15761.9 |
| topoisomerase | CSX02_00930 | Not Available | Negative | 172171 - 174072 | 70496.8 |
| mobilization protein | CSX02_00935 | Not Available | Negative | 174087 - 175724 | 61989.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

