Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-thr | Not Available | Not Available | Positive | 2360874 - 2360946 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 2361059 - 2361130 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2361159 - 2361232 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 2361248 - 2361321 | Not Available |
| Trna-pseudo | Not Available | Not Available | Positive | 2361340 - 2361413 | Not Available |
| Trna-met | Not Available | Not Available | Positive | 2361425 - 2361498 | Not Available |
| Trna-phe | Not Available | Not Available | Positive | 2361504 - 2361576 | Not Available |
| hypothetical protein | CSX02_11160 | Not Available | Positive | 2361636 - 2362361 | 27488.6 |
| flagellar capping protein | CSX02_11165 | Not Available | Positive | 2362562 - 2363866 | 47910.8 |
| 50s ribosomal protein l33 | CSX02_11170 | Not Available | Positive | 2364078 - 2364227 | 6090.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

