Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | CSX02_11075 | Not Available | Negative | 2353176 - 2353841 | 24048.0 |
| hypothetical protein | CSX02_11080 | Not Available | Negative | 2353867 - 2354529 | 25838.0 |
| hypothetical protein | CSX02_11085 | Not Available | Negative | 2354788 - 2355214 | 16542.2 |
| hypothetical protein | CSX02_11090 | Not Available | Positive | 2355215 - 2355434 | 8440.89 |
| transcriptional regulator | CSX02_11095 | Not Available | Positive | 2355872 - 2355959 | 3416.1 |
| hypothetical protein | CSX02_11105 | Not Available | Negative | 2356685 - 2356881 | 7866.73 |
| hypothetical protein | CSX02_11110 | Not Available | Positive | 2357346 - 2358185 | 31820.2 |
| caax protease | CSX02_11115 | Not Available | Negative | 2358236 - 2359129 | 34986.9 |
| hypothetical protein | CSX02_11120 | Not Available | Negative | 2359524 - 2359851 | 12889.4 |
| hypothetical protein | CSX02_11125 | Not Available | Positive | 2360440 - 2360659 | 8510.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

