Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iv | CSX02_10965 | Not Available | Negative | 2331812 - 2332717 | 33435.4 |
| hypothetical protein | CSX02_10970 | Not Available | Positive | 2332843 - 2333706 | 30993.9 |
| flavodoxin family protein | CSX02_10975 | Not Available | Negative | 2333714 - 2334700 | 36634.9 |
| glucose-6-phosphate isomerase | CSX02_10980 | Not Available | Negative | 2334821 - 2336389 | 56716.1 |
| hypothetical protein | CSX02_10985 | Not Available | Negative | 2336927 - 2337289 | 14057.7 |
| hypothetical protein | CSX02_10995 | Not Available | Negative | 2337831 - 2338553 | 28381.7 |
| hypothetical protein | CSX02_11000 | Not Available | Negative | 2338546 - 2338770 | 8977.67 |
| hydrolase | CSX02_11005 | Not Available | Negative | 2338872 - 2339477 | 23191.6 |
| gnat family n-acetyltransferase | CSX02_11010 | Not Available | Positive | 2339743 - 2340300 | 21018.8 |
| flavodoxin | CSX02_11015 | Not Available | Negative | 2340548 - 2341714 | 43243.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

