Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_00730 | Not Available | Positive | 135414 - 135662 | 9326.58 |
| hypothetical protein | CSX02_00735 | Not Available | Negative | 135659 - 135853 | 7647.43 |
| putative dna modification/repair radical sam protein | CSX02_00740 | Not Available | Positive | 135870 - 137333 | 55291.8 |
| dna metabolism protein | CSX02_00745 | Not Available | Positive | 137330 - 138130 | 31828.4 |
| zip zinc transporter | CSX02_00750 | Not Available | Positive | 138168 - 138947 | 27458.6 |
| acyl-coa thioesterase | CSX02_00755 | Not Available | Negative | 139035 - 139484 | 17689.1 |
| hypothetical protein | CSX02_00760 | Not Available | Negative | 139965 - 140535 | 20537.2 |
| hypothetical protein | CSX02_00765 | Not Available | Negative | 140726 - 141565 | 31902.5 |
| hypothetical protein | CSX02_00770 | Not Available | Negative | 141579 - 142580 | 38463.7 |
| hypothetical protein | CSX02_00775 | Not Available | Negative | 142577 - 142789 | 8407.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

