Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_00680 | Not Available | Positive | 126295 - 126678 | 14085.7 |
| hypothetical protein | CSX02_00685 | Not Available | Positive | 126772 - 127977 | 46396.2 |
| hypothetical protein | CSX02_00690 | Not Available | Positive | 128006 - 128620 | 23511.8 |
| hypothetical protein | CSX02_00695 | Not Available | Positive | 128614 - 129435 | 31699.1 |
| multidrug abc transporter atp-binding protein | CSX02_00700 | Not Available | Positive | 129495 - 130049 | 20520.0 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | CSX02_00705 | Not Available | Positive | 130066 - 131133 | 40443.3 |
| atp-dependent lon protease | CSX02_00710 | Not Available | Negative | 131130 - 132614 | 55097.8 |
| transposase | CSX02_00715 | Not Available | Positive | 132976 - 133734 | 29967.6 |
| low specificity l-threonine aldolase | CSX02_00720 | Not Available | Positive | 133849 - 134883 | 38446.6 |
| hypothetical protein | CSX02_00725 | Not Available | Positive | 134909 - 135286 | 14559.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

