Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | CSX02_00630 | Not Available | Positive | 115073 - 115993 | 35017.1 |
| hypothetical protein | CSX02_00635 | Not Available | Positive | 116014 - 116406 | 14856.5 |
| ap endonuclease | CSX02_00640 | Not Available | Positive | 116417 - 117469 | 39964.6 |
| fmn reductase | CSX02_00645 | Not Available | Positive | 117490 - 118491 | 37176.9 |
| hypothetical protein | CSX02_00650 | Not Available | Positive | 119034 - 120782 | 66949.2 |
| hypothetical protein | CSX02_00655 | Not Available | Positive | 120785 - 121681 | 33182.6 |
| heme abc transporter atp-binding protein | CSX02_00660 | Not Available | Positive | 121732 - 123288 | 59328.3 |
| hypothetical protein | CSX02_00665 | Not Available | Positive | 123388 - 123777 | 14844.7 |
| thioredoxin | CSX02_00670 | Not Available | Negative | 123868 - 124176 | 11087.2 |
| phosphoenolpyruvate carboxykinase (atp) | CSX02_00675 | Not Available | Positive | 124493 - 126097 | 59063.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

