Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate propanoyltransferase | CSX02_00580 | Not Available | Positive | 107395 - 108045 | 23295.1 |
| ethanolamine utilization protein eutn | CSX02_00585 | Not Available | Positive | 108073 - 108342 | 9160.26 |
| nadh-quinone oxidoreductase subunit j | CSX02_00590 | Not Available | Positive | 108346 - 109680 | 48101.6 |
| propanediol utilization protein | CSX02_00595 | Not Available | Positive | 109683 - 110231 | 19160.4 |
| deor family transcriptional regulator | CSX02_00600 | Not Available | Positive | 110256 - 111032 | 28489.5 |
| aspartate carbamoyltransferase | CSX02_00605 | Not Available | Positive | 111229 - 112155 | 34898.1 |
| aspartate carbamoyltransferase regulatory subunit | CSX02_00610 | Not Available | Positive | 112168 - 112602 | 16410.2 |
| bifunctional phosphoserine phosphatase/homoserine phosphotransferase thrh | CSX02_00615 | Not Available | Positive | 112684 - 113283 | 22475.2 |
| degv family protein | CSX02_00620 | Not Available | Positive | 113318 - 114163 | 30517.8 |
| had family hydrolase | CSX02_00625 | Not Available | Negative | 114165 - 114827 | 25028.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

