Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycyl-radical activating family protein | CSX02_00530 | Not Available | Positive | 100885 - 101679 | 29925.2 |
| bmc domain-containing protein | CSX02_00535 | Not Available | Positive | 101681 - 102052 | 13336.1 |
| ethanolamine utilization protein eutp | CSX02_00540 | Not Available | Positive | 102049 - 102477 | 15896.1 |
| aldolase | CSX02_00545 | Not Available | Positive | 102511 - 103356 | 31135.5 |
| aldehyde dehydrogenase eute | CSX02_00550 | Not Available | Positive | 103370 - 104761 | 49937.6 |
| theronine dehydrogenase | CSX02_00555 | Not Available | Positive | 104777 - 105988 | 43642.6 |
| bmc domain-containing protein | CSX02_00560 | Not Available | Positive | 106000 - 106320 | 11116.5 |
| bmc domain-containing protein | CSX02_00565 | Not Available | Positive | 106337 - 106624 | 9704.86 |
| microcompartment protein | CSX02_00570 | Not Available | Positive | 106631 - 107023 | 13903.9 |
| bmc domain-containing protein | CSX02_00575 | Not Available | Positive | 107039 - 107317 | 9450.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

