Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_00480 | Not Available | Negative | 83053 - 84474 | 54731.8 |
| restriction endonuclease | CSX02_00485 | Not Available | Negative | 84489 - 87104 | 100574.0 |
| restriction endonuclease | CSX02_00490 | Not Available | Negative | 87122 - 90781 | 140021.0 |
| atpase | CSX02_00495 | Not Available | Negative | 90797 - 94420 | 138363.0 |
| hypothetical protein | CSX02_00500 | Not Available | Negative | 94436 - 95014 | 22666.2 |
| hypothetical protein | CSX02_00505 | Not Available | Negative | 95014 - 95622 | 23305.9 |
| cro/cl family transcriptional regulator | CSX02_00510 | Not Available | Negative | 95609 - 95839 | 8611.52 |
| hypothetical protein | CSX02_00515 | Not Available | Negative | 96134 - 96604 | 17887.5 |
| hypothetical protein | CSX02_00520 | Not Available | Positive | 96608 - 98115 | 53904.3 |
| formate c-acetyltransferase/glycerol dehydratase family glycyl radical enzyme | CSX02_00525 | Not Available | Positive | 98328 - 100850 | 94336.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

