Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | CSX02_06635 | Not Available | Negative | 1383944 - 1384759 | 30713.6 |
| phosphatidylserine synthase | CSX02_06640 | Not Available | Negative | 1384772 - 1385458 | 25371.2 |
| hypothetical protein | CSX02_06645 | Not Available | Negative | 1385442 - 1386500 | 39242.3 |
| phosphatidic acid phosphatase | CSX02_06650 | Not Available | Negative | 1386603 - 1387316 | 27183.4 |
| aldo/keto reductase | CSX02_06655 | Not Available | Negative | 1387337 - 1388242 | 33883.8 |
| hypothetical protein | CSX02_06660 | Not Available | Negative | 1388330 - 1389865 | 58309.7 |
| arac family transcriptional regulator | CSX02_06665 | Not Available | Negative | 1389858 - 1390745 | 34355.0 |
| abc transporter substrate-binding protein | CSX02_06670 | Not Available | Positive | 1391096 - 1392391 | 46570.4 |
| sugar abc transporter permease | CSX02_06675 | Not Available | Positive | 1392494 - 1393378 | 33251.1 |
| carbohydrate abc transporter permease | CSX02_06680 | Not Available | Positive | 1393396 - 1394223 | 30299.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

