Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | CSX02_00425 | Not Available | Negative | 69425 - 70504 | 42225.4 |
| phosphoribosyl-atp pyrophosphohydrolase | CSX02_00430 | Not Available | Negative | 70576 - 70875 | 11579.8 |
| nucleotide pyrophosphohydrolase | CSX02_00435 | Not Available | Negative | 70894 - 71214 | 12410.5 |
| hypothetical protein | CSX02_00440 | Not Available | Negative | 71357 - 74602 | 127343.0 |
| hypothetical protein | CSX02_00445 | Not Available | Negative | 74583 - 75092 | 19708.5 |
| hypothetical protein | CSX02_00450 | Not Available | Negative | 75132 - 76433 | 48390.2 |
| hypothetical protein | CSX02_00460 | Not Available | Negative | 76925 - 77494 | 21915.5 |
| brex system lon protease-like protein brxl | CSX02_00465 | Not Available | Negative | 77562 - 79676 | 78450.5 |
| hypothetical protein | CSX02_00470 | Not Available | Negative | 79711 - 80505 | 30450.6 |
| brex-1 system phosphatase pglz type a | CSX02_00475 | Not Available | Negative | 80515 - 83031 | 97639.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

