Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside kinase | CSX02_05920 | Not Available | Positive | 1237977 - 1239662 | 64471.3 |
| hypothetical protein | CSX02_05930 | Not Available | Positive | 1240216 - 1240632 | 16755.2 |
| hypothetical protein | CSX02_05935 | Not Available | Positive | 1240636 - 1241487 | 33798.5 |
| molecular chaperone dnaj | CSX02_05940 | Not Available | Positive | 1241484 - 1242131 | 24636.4 |
| sec-c domain-containing protein | CSX02_05945 | Not Available | Positive | 1242583 - 1243083 | 19114.9 |
| prolipoprotein diacylglyceryl transferase | CSX02_05950 | Not Available | Positive | 1243099 - 1243968 | 32654.4 |
| hypothetical protein | CSX02_05955 | Not Available | Positive | 1244164 - 1245816 | 59381.7 |
| transcriptional regulator mraz | CSX02_05960 | Not Available | Positive | 1246060 - 1246491 | 16509.7 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase | CSX02_05965 | Not Available | Positive | 1246509 - 1247447 | 35040.1 |
| hypothetical protein | CSX02_05970 | Not Available | Positive | 1247457 - 1247927 | 18141.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

