Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | CSX02_00370 | Not Available | Negative | 58573 - 59037 | 17406.6 |
| marr family transcriptional regulator | CSX02_00375 | Not Available | Negative | 59042 - 59485 | 16804.2 |
| multidrug dmt transporter permease | CSX02_00380 | Not Available | Negative | 59665 - 60531 | 30682.7 |
| hypothetical protein | CSX02_00390 | Not Available | Negative | 62420 - 62575 | 6814.09 |
| hypothetical protein | CSX02_00395 | Not Available | Negative | 62587 - 62784 | 7220.56 |
| hypothetical protein | CSX02_00400 | Not Available | Negative | 62877 - 63950 | 40547.2 |
| hypothetical protein | CSX02_00405 | Not Available | Negative | 64170 - 64682 | 19637.8 |
| aaa family atpase | CSX02_00410 | Not Available | Negative | 65064 - 66446 | 53072.5 |
| abc transporter permease | CSX02_00415 | Not Available | Negative | 66638 - 67768 | 44217.1 |
| hypothetical protein | CSX02_00420 | Not Available | Negative | 67842 - 69323 | 57845.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

