Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter atp-binding protein | CSX02_05515 | Not Available | Negative | 1144424 - 1145065 | 23740.0 |
| hypothetical protein | CSX02_05520 | Not Available | Negative | 1145085 - 1145891 | 30363.0 |
| hypothetical protein | CSX02_05525 | Not Available | Negative | 1145888 - 1146451 | 21059.2 |
| hypothetical protein | CSX02_05530 | Not Available | Negative | 1146444 - 1147283 | 32055.1 |
| hypothetical protein | CSX02_05535 | Not Available | Negative | 1147287 - 1147961 | 24884.2 |
| hypothetical protein | CSX02_05540 | Not Available | Negative | 1148333 - 1148614 | 11218.0 |
| copper-translocating p-type atpase | CSX02_05545 | Not Available | Negative | 1148656 - 1151283 | 92685.5 |
| hypothetical protein | CSX02_05550 | Not Available | Negative | 1151289 - 1151606 | 11929.6 |
| beta-glucosidase | CSX02_05555 | Not Available | Positive | 1152171 - 1154576 | 88010.3 |
| fmn reductase | CSX02_05560 | Not Available | Positive | 1154843 - 1155805 | 35810.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

