Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CSX02_05460 | Not Available | Positive | 1132014 - 1134068 | 73781.9 |
| hypothetical protein | CSX02_05470 | Not Available | Negative | 1134322 - 1134549 | 8721.32 |
| site-specific integrase | CSX02_05475 | Not Available | Negative | 1134696 - 1135766 | 41951.3 |
| glutamine-hydrolyzing gmp synthase | CSX02_05480 | Not Available | Negative | 1135948 - 1137525 | 58506.2 |
| glycosyl hydrolase family 5 | CSX02_05485 | Not Available | Negative | 1137638 - 1138711 | 39387.5 |
| fucose isomerase | CSX02_05490 | Not Available | Positive | 1139017 - 1140582 | 58868.6 |
| cysteine desulfurase csda | CSX02_05495 | Not Available | Positive | 1140594 - 1142171 | 57805.3 |
| hypothetical protein | CSX02_05500 | Not Available | Positive | 1142144 - 1142560 | 16013.3 |
| hypothetical protein | CSX02_05505 | Not Available | Negative | 1142502 - 1143419 | 34464.4 |
| glutaredoxin | CSX02_05510 | Not Available | Negative | 1143852 - 1144169 | 11996.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

