Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CSX02_05410 | Not Available | Negative | 1119249 - 1120598 | 49678.2 |
| hypothetical protein | CSX02_05415 | Not Available | Negative | 1120604 - 1121446 | 30915.4 |
| 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate carboxylase | CSX02_05420 | Not Available | Negative | 1121461 - 1122210 | 26511.2 |
| hypothetical protein | CSX02_05425 | Not Available | Negative | 1122293 - 1125001 | 98703.6 |
| carbohydrate kinase | CSX02_05430 | Not Available | Negative | 1125189 - 1126136 | 34277.9 |
| laci family transcriptional regulator | CSX02_05435 | Not Available | Negative | 1126180 - 1127157 | 36019.1 |
| sucrose phosphorylase | CSX02_05440 | Not Available | Negative | 1127224 - 1128639 | 54551.6 |
| sugar abc transporter permease | CSX02_05445 | Not Available | Negative | 1128678 - 1129535 | 31616.2 |
| sugar abc transporter permease | CSX02_05450 | Not Available | Negative | 1129535 - 1130413 | 31861.3 |
| capsular biosynthesis protein | CSX02_05455 | Not Available | Negative | 1130476 - 1131603 | 41233.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

