Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | CSX02_05360 | Not Available | Negative | 1103957 - 1105210 | 48657.4 |
| hypothetical protein | CSX02_05365 | Not Available | Negative | 1105282 - 1105467 | 7115.69 |
| dna-binding protein | CSX02_05370 | Not Available | Negative | 1105525 - 1106165 | 24246.3 |
| dna polymerase iii subunit alpha | CSX02_05375 | Not Available | Negative | 1106274 - 1109762 | 131874.0 |
| hypothetical protein | CSX02_05380 | Not Available | Positive | 1110530 - 1112455 | 72302.4 |
| dna-binding response regulator | CSX02_05385 | Not Available | Negative | 1112530 - 1114005 | 58044.4 |
| two-component sensor histidine kinase | CSX02_05390 | Not Available | Negative | 1114002 - 1115873 | 71850.5 |
| abc transporter substrate-binding protein | CSX02_05395 | Not Available | Negative | 1115877 - 1117526 | 63155.1 |
| alpha/beta hydrolase | CSX02_05400 | Not Available | Negative | 1117486 - 1118466 | 38383.2 |
| glycerophosphodiester phosphodiesterase | CSX02_05405 | Not Available | Negative | 1118441 - 1119238 | 30163.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

