Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hd domain-containing protein | CSX02_05310 | Not Available | Negative | 1096591 - 1097250 | 25375.1 |
| adp-ribosylglycohydrolase | CSX02_05315 | Not Available | Negative | 1097401 - 1098360 | 35830.6 |
| hypothetical protein | CSX02_05320 | Not Available | Negative | 1098364 - 1099113 | 28569.3 |
| hypothetical protein | CSX02_05325 | Not Available | Negative | 1099270 - 1099641 | 14177.1 |
| hypothetical protein | CSX02_05330 | Not Available | Positive | 1099872 - 1100414 | 21587.2 |
| hypothetical protein | CSX02_05335 | Not Available | Positive | 1100415 - 1101221 | 30869.8 |
| hypothetical protein | CSX02_05340 | Not Available | Negative | 1101562 - 1101906 | 13354.9 |
| hypothetical protein | CSX02_05345 | Not Available | Negative | 1102045 - 1102737 | 27059.9 |
| transcriptional regulator | CSX02_05350 | Not Available | Positive | 1102854 - 1103210 | 13332.2 |
| hypothetical protein | CSX02_05355 | Not Available | Negative | 1103299 - 1103949 | 25444.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

