Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf327 domain-containing protein | CSX02_05060 | Not Available | Negative | 1044336 - 1044779 | 16516.9 |
| guanylate kinase | CSX02_05065 | Not Available | Negative | 1044789 - 1045385 | 23339.8 |
| hypothetical protein | CSX02_05070 | Not Available | Negative | 1045364 - 1046725 | 50182.5 |
| hypothetical protein | CSX02_05075 | Not Available | Negative | 1046725 - 1047588 | 33664.8 |
| hypothetical protein | CSX02_05080 | Not Available | Negative | 1047589 - 1048179 | 23181.1 |
| riboflavin biosynthesis protein ribd | CSX02_05085 | Not Available | Positive | 1048501 - 1049613 | 40733.1 |
| riboflavin synthase | CSX02_05090 | Not Available | Positive | 1049658 - 1050296 | 22920.4 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | CSX02_05095 | Not Available | Positive | 1050328 - 1051536 | 45111.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | CSX02_05100 | Not Available | Positive | 1051576 - 1052049 | 16874.7 |
| adenylate cyclase | CSX02_05105 | Not Available | Positive | 1052279 - 1053997 | 60915.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

