Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Agathobacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Agathobacter |
| Species | Agathobacter ruminis |
| Strain | strain JK623 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
812134 bp
Thymine Count
802139 bp
Guanine Count
630809 bp
Cytosine Count
613542 bp
Genome Length
2858624 bp
Protein-coding Genes
2544 genes
Non-Coding Genes
78 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CSX02_05010 | Not Available | Negative | 1037906 - 1038271 | 13593.8 |
| 30s ribosomal protein s18 | CSX02_05015 | Not Available | Negative | 1038576 - 1038830 | 9793.17 |
| single-stranded dna-binding protein | CSX02_05020 | Not Available | Negative | 1038848 - 1039285 | 15909.5 |
| 30s ribosomal protein s6 | CSX02_05025 | Not Available | Negative | 1039308 - 1039598 | 10940.0 |
| duf951 domain-containing protein | CSX02_05030 | Not Available | Negative | 1039705 - 1039899 | 7329.99 |
| nad-dependent protein deacylase | CSX02_05035 | Not Available | Negative | 1039896 - 1040666 | 28792.3 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | CSX02_05040 | Not Available | Negative | 1040675 - 1041511 | 32049.5 |
| sam-dependent methyltransferase | CSX02_05045 | Not Available | Negative | 1041508 - 1042278 | 29446.6 |
| stage 0 sporulation protein | CSX02_05050 | Not Available | Negative | 1042256 - 1043323 | 40211.7 |
| dna polymerase iii subunit delta | CSX02_05055 | Not Available | Negative | 1043311 - 1044315 | 38705.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

